STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPL3160S ribosomal protein L31. (124 aa)    
Predicted Functional Partners:
ENSGMOP00000012718
FAU ubiquitin like and ribosomal protein S30 fusion a.
   
 0.999
ENSGMOP00000001035
Ribosomal protein L9.
   
 0.996
rpl39
Ribosomal protein L39.
   
 0.996
ENSGMOP00000001973
Ribosomal protein L35a.
   
 0.996
ENSGMOP00000002317
Ribosomal protein L30.
   
 0.996
rpl29
Ribosomal protein L29.
   
 0.996
ENSGMOP00000003830
Ribosomal protein L24.
  
 0.996
ENSGMOP00000005462
Ribosomal protein L38.
   
 0.996
RPL27A
Ribosomal protein L27a.
   
 0.996
RPL19
Ribosomal protein L19.
   
 0.996
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.