STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmem167bTransmembrane protein 167B. (74 aa)    
Predicted Functional Partners:
ENSGMOP00000005715
Ribonuclease P/MRP 30 subunit.
   
 
 0.851
ENSGMOP00000002613
annotation not available
   
 
 0.795
ENSGMOP00000004147
Ribonuclease P and MRP subunit p25, b.
   
 
 0.795
ENSGMOP00000010453
Ribonuclease P/MRP 25 subunit-like.
   
 
 0.795
ENSGMOP00000010080
annotation not available
    
  0.721
IER3IP1
Immediate early response 3 interacting protein 1.
   
   0.605
ENSGMOP00000006612
Small nuclear ribonucleoprotein polypeptide G.
   
    0.599
sf3b5
Splicing factor 3b subunit 5.
   
  
 0.575
ENSGMOP00000006586
Sec1 family domain containing 1.
   
  
 0.562
ENSGMOP00000009107
annotation not available
     
 0.528
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.