STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000004809Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6. (744 aa)    
Predicted Functional Partners:
ENSGMOP00000014534
Intersectin 2b.
     
0.981
ENSGMOP00000019906
Intersectin 2a.
     
0.981
ENSGMOP00000013736
annotation not available
    
 0.952
ENSGMOP00000019231
G protein-coupled receptor kinase interacting ArfGAP 1.
    
 0.952
ENSGMOP00000020609
P21 protein (Cdc42/Rac)-activated kinase 2b.
    
 0.952
ENSGMOP00000003321
annotation not available
    
 0.944
ENSGMOP00000013139
P21 protein (Cdc42/Rac)-activated kinase 1.
    
 0.944
ENSGMOP00000006551
P21 protein (Cdc42/Rac)-activated kinase 6b.
    
 0.924
ENSGMOP00000006558
P21 protein (Cdc42/Rac)-activated kinase 4.
    
 0.924
ENSGMOP00000012407
P21 protein (Cdc42/Rac)-activated kinase 6a.
    
 0.924
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.