STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000004814HMG box domain containing 4a. (588 aa)    
Predicted Functional Partners:
ENSGMOP00000007861
Thyroid hormone receptor interactor 12.
    
 
 0.674
ENSGMOP00000003090
Zgc:92664.
    
 
 0.629
ENSGMOP00000004604
MCF.2 cell line derived transforming sequence a.
      
 0.524
ENSGMOP00000004882
FAD-dependent oxidoreductase domain containing 2.
      
 0.519
ENSGMOP00000017176
annotation not available
      
 0.519
ENSGMOP00000007213
Cell division cycle and apoptosis regulator 1.
      
 0.517
ENSGMOP00000006737
annotation not available
     
 0.512
ENSGMOP00000007918
Transcription factor 7 like 2.
     
 0.512
ENSGMOP00000018635
Lymphoid enhancer-binding factor 1.
     
 0.512
ENSGMOP00000019406
Transcription factor 7 like 1a.
     
 0.512
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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