STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000004844FtsJ RNA 2'-O-methyltransferase 1. (298 aa)    
Predicted Functional Partners:
ENSGMOP00000020776
WD repeat domain 6.
   
 
 0.983
ENSGMOP00000013914
Pescadillo.
   
   0.951
ENSGMOP00000017264
GTP binding protein 4.
   
 
 0.950
ENSGMOP00000007443
annotation not available
   
 
 0.949
ENSGMOP00000009578
annotation not available
   
 
 0.949
ENSGMOP00000003787
NOP58 ribonucleoprotein homolog (yeast).
  
 0.944
ENSGMOP00000003379
NSA2 ribosome biogenesis homolog (S. cerevisiae).
  
 
 0.928
ENSGMOP00000000681
NOC2-like nucleolar associated transcriptional repressor.
   
 
 0.924
ENSGMOP00000004342
Ribosomal L24 domain containing 1.
   
 
 0.919
ENSGMOP00000018106
WD repeat domain 74.
   
 
 0.918
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.