STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000004886Ubiquitin specific peptidase 31. (1271 aa)    
Predicted Functional Partners:
ENSGMOP00000003361
Ubiquitin specific peptidase 10.
    
0.730
pcna
Proliferating cell nuclear antigen.
   
  0.704
ENSGMOP00000012733
Ribosomal protein S27a.
    
 0.703
ENSGMOP00000015220
TNF receptor-associated factor 6.
    
 0.700
ENSGMOP00000018285
Mitochondrial ribosomal protein L3.
   
 
 0.675
ENSGMOP00000005220
Mitochondrial ribosomal protein L11.
   
 
 0.674
rps2
Ribosomal protein S2.
    
 
 0.670
ENSGMOP00000008109
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.669
ENSGMOP00000011725
annotation not available
   
 
 0.666
ENSGMOP00000013496
Mitochondrial ribosomal protein S14.
    
 
 0.659
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.