STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000004889annotation not available (198 aa)    
Predicted Functional Partners:
ENSGMOP00000016433
Stem-loop binding protein.
   
 
 0.787
ENSGMOP00000003235
Stem-loop binding protein 2.
   
 
 0.786
ENSGMOP00000017011
Exosome component 5.
   
 0.705
ENSGMOP00000006452
Dicer 1, ribonuclease type III.
    
 
 0.678
ENSGMOP00000002317
Ribosomal protein L30.
     
 0.642
ENSGMOP00000005462
Ribosomal protein L38.
     
 0.639
RPL19
Ribosomal protein L19.
    
  0.639
ENSGMOP00000008942
Ribosomal protein L4.
    
 0.621
rpl8
Ribosomal protein L8.
   
 
  0.610
ENSGMOP00000015635
Testis expressed 10.
   
 
  0.610
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.