STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000004965Glial fibrillary acidic protein. (385 aa)    
Predicted Functional Partners:
ENSGMOP00000000184
Titin-cap (telethonin).
   
 
 0.708
LOC115533208
Myosin light chain 1, skeletal muscle isoform-like.
   
 0.696
ENSGMOP00000018475
annotation not available
   
 0.686
ENSGMOP00000018546
annotation not available
   
 0.686
ENSGMOP00000018578
Caspase 6b.2, apoptosis-related cysteine peptidase.
   
 0.686
banf1
Barrier to autointegration factor 1.
   
 0.681
ENSGMOP00000021849
annotation not available
   
 0.681
GAN
Gigaxonin.
    
 
 0.668
ENSGMOP00000010365
annotation not available
    
 
0.668
EGFLAM
EGF like, fibronectin type III and laminin G domains.
   
  0.662
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.