STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000005172Spermatid perinuclear RNA binding protein. (675 aa)    
Predicted Functional Partners:
ENSGMOP00000014686
Interleukin enhancer binding factor 2.
   
 
0.767
ENSGMOP00000004812
U2 small nuclear RNA auxiliary factor 2a.
   
 
 0.514
ENSGMOP00000020188
annotation not available
    
 
 0.493
ENSGMOP00000020208
Eukaryotic translation initiation factor 2-alpha kinase 2.
    
 
 0.493
CSK
C-terminal Src kinase.
 
   
  0.491
ENSGMOP00000013672
annotation not available
 
   
  0.491
ENSGMOP00000001336
TAR (HIV) RNA binding protein 2.
    
 
 0.460
ENSGMOP00000004253
Protein kinase, interferon-inducible double stranded RNA dependent activator.
    
 
 0.460
ENSGMOP00000019703
Interleukin enhancer binding factor 3b.
  
  
0.423
ENSGMOP00000000727
PDZ and LIM domain 3a.
      
 0.422
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.