STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000005185Taxilin gamma. (371 aa)    
Predicted Functional Partners:
ENSGMOP00000003702
Syntaxin 4.
    
 0.679
ENSGMOP00000000586
Syntaxin 1A (brain).
    
 0.648
ENSGMOP00000007217
Syntaxin 2b.
    
 0.648
LOC115533324
syntaxin-1B.
    
 0.648
ENSGMOP00000015273
Syntaxin 3A.
    
 0.648
ENSGMOP00000009576
Syntaxin 11b, tandem duplicate 2.
    
 0.606
ENSGMOP00000009821
annotation not available
    
 0.606
ENSGMOP00000000794
annotation not available
    
 0.602
STX19
Syntaxin 19.
    
 0.587
trappc3
Trafficking protein particle complex 3.
    
 
 0.511
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.