ENSGMOP00000005223 protein (Gadus morhua) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSGMOP00000005223

Influenza virus NS1A binding protein a. (650 aa)

Predicted Functional Partners:

ENSGMOP00000002178

0.687

ENSGMOP00000011181

0.661

ENSGMOP00000015624

0.660

PRPSAP1

0.660

ENSGMOP00000019786

0.660

ENSGMOP00000010359

0.648

ENSGMOP00000006203

0.639

ENSGMOP00000006374

0.636

CUL3

0.636

ENSGMOP00000018480

0.636

Your Current Organism:

Gadus morhua

NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CUL3	ENSGMOP00000002178	ENSGMOP00000006604	ENSGMOP00000002178	Cullin-3-like.	Ring-box 1, E3 ubiquitin protein ligase.	0.983
CUL3	ENSGMOP00000005223	ENSGMOP00000006604	ENSGMOP00000005223	Cullin-3-like.	Influenza virus NS1A binding protein a.	0.636
CUL3	ENSGMOP00000006374	ENSGMOP00000006604	ENSGMOP00000006374	Cullin-3-like.	annotation not available	0.645
CUL3	ENSGMOP00000011181	ENSGMOP00000006604	ENSGMOP00000011181	Cullin-3-like.	UBX domain protein 7.	0.995
ENSGMOP00000002178	CUL3	ENSGMOP00000002178	ENSGMOP00000006604	Ring-box 1, E3 ubiquitin protein ligase.	Cullin-3-like.	0.983
ENSGMOP00000002178	ENSGMOP00000005223	ENSGMOP00000002178	ENSGMOP00000005223	Ring-box 1, E3 ubiquitin protein ligase.	Influenza virus NS1A binding protein a.	0.687
ENSGMOP00000002178	ENSGMOP00000006374	ENSGMOP00000002178	ENSGMOP00000006374	Ring-box 1, E3 ubiquitin protein ligase.	annotation not available	0.990
ENSGMOP00000002178	ENSGMOP00000011181	ENSGMOP00000002178	ENSGMOP00000011181	Ring-box 1, E3 ubiquitin protein ligase.	UBX domain protein 7.	0.994
ENSGMOP00000002178	ENSGMOP00000018480	ENSGMOP00000002178	ENSGMOP00000018480	Ring-box 1, E3 ubiquitin protein ligase.	Cullin 3b.	0.983
ENSGMOP00000005223	CUL3	ENSGMOP00000005223	ENSGMOP00000006604	Influenza virus NS1A binding protein a.	Cullin-3-like.	0.636
ENSGMOP00000005223	ENSGMOP00000002178	ENSGMOP00000005223	ENSGMOP00000002178	Influenza virus NS1A binding protein a.	Ring-box 1, E3 ubiquitin protein ligase.	0.687
ENSGMOP00000005223	ENSGMOP00000006203	ENSGMOP00000005223	ENSGMOP00000006203	Influenza virus NS1A binding protein a.	N-acetylneuraminic acid phosphatase.	0.639
ENSGMOP00000005223	ENSGMOP00000006374	ENSGMOP00000005223	ENSGMOP00000006374	Influenza virus NS1A binding protein a.	annotation not available	0.636
ENSGMOP00000005223	ENSGMOP00000010359	ENSGMOP00000005223	ENSGMOP00000010359	Influenza virus NS1A binding protein a.	annotation not available	0.648
ENSGMOP00000005223	ENSGMOP00000011181	ENSGMOP00000005223	ENSGMOP00000011181	Influenza virus NS1A binding protein a.	UBX domain protein 7.	0.661
ENSGMOP00000005223	ENSGMOP00000015624	ENSGMOP00000005223	ENSGMOP00000015624	Influenza virus NS1A binding protein a.	annotation not available	0.660
ENSGMOP00000005223	ENSGMOP00000018480	ENSGMOP00000005223	ENSGMOP00000018480	Influenza virus NS1A binding protein a.	Cullin 3b.	0.636
ENSGMOP00000005223	ENSGMOP00000019786	ENSGMOP00000005223	ENSGMOP00000019786	Influenza virus NS1A binding protein a.	annotation not available	0.660
ENSGMOP00000005223	PRPSAP1	ENSGMOP00000005223	ENSGMOP00000015927	Influenza virus NS1A binding protein a.	Phosphoribosyl pyrophosphate synthase-associated protein 1.	0.660
ENSGMOP00000006203	ENSGMOP00000005223	ENSGMOP00000006203	ENSGMOP00000005223	N-acetylneuraminic acid phosphatase.	Influenza virus NS1A binding protein a.	0.639