STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
psmg3Proteasome assembly chaperone 3. (121 aa)    
Predicted Functional Partners:
ENSGMOP00000002471
Proteasome (prosome, macropain) assembly chaperone 2.
    
 
 0.920
ENSGMOP00000018203
annotation not available
   
 
 0.851
psma5
Proteasome 20S subunit alpha 5.
   
 
 0.689
ENSGMOP00000010221
Proteasome 20S subunit alpha 2.
   
   0.681
psma8
Proteasome 20S subunit alpha 8.
   
 
 0.678
ENSGMOP00000005108
Proteasome maturation protein.
   
 
 0.666
ENSGMOP00000020821
annotation not available
   
 
 0.646
ENSGMOP00000014818
Proteasome 20S subunit alpha 1.
   
   0.638
ENSGMOP00000021065
Proteasome 20S subunit alpha 4.
   
   0.598
ENSGMOP00000013373
Mitochondrial ribosomal protein S18A.
   
 
 0.596
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.