STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000005364annotation not available (240 aa)    
Predicted Functional Partners:
LOC115560196
Cytochrome c.
     
 0.607
LOC115533447
Cytochrome c-like.
     
 0.607
ENSGMOP00000005887
Caspase 7, apoptosis-related cysteine peptidase.
     
 0.426
ENSGMOP00000017958
Caspase 9, apoptosis-related cysteine peptidase.
     
 0.425
CASP3
Caspase 3.
     
 0.424
ENSGMOP00000002277
annotation not available
     
 0.424
ENSGMOP00000012616
annotation not available
     
 0.424
ENSGMOP00000017931
Caspase 3, apoptosis-related cysteine peptidase b.
     
 0.424
ENSGMOP00000017941
annotation not available
     
 0.424
ENSGMOP00000011865
Caspase 2, apoptosis-related cysteine peptidase.
     
 0.416
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.