STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000005384TBC1 domain family, member 22a. (564 aa)    
Predicted Functional Partners:
ENSGMOP00000021297
Mitochondrial ribosomal protein S6.
    
   0.800
ENSGMOP00000011725
annotation not available
    
 
 0.676
ENSGMOP00000016144
acyl-Coenzyme A binding domain containing 3.
    
 
 0.658
ENSGMOP00000004998
Mitochondrial ribosomal protein S35.
    
   0.642
mrpl41
Mitochondrial ribosomal protein L41.
   
   0.640
ENSGMOP00000002085
Mitochondrial ribosomal protein L33.
    
   0.628
ENSGMOP00000004771
Mitochondrial ribosomal protein L23.
    
   0.628
ENSGMOP00000008615
Mitochondrial ribosomal protein S5.
    
   0.628
ENSGMOP00000008696
Mitochondrial ribosomal protein L20.
    
   0.628
ENSGMOP00000010582
Mitochondrial ribosomal protein L43.
    
   0.628
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.