STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000005436Tudor domain containing 6. (1268 aa)    
Predicted Functional Partners:
ENSGMOP00000008123
Piwi-like RNA-mediated gene silencing 2.
   
 0.957
ENSGMOP00000007172
Piwi-like RNA-mediated gene silencing 1.
   
 0.955
ENSGMOP00000011495
Tudor domain containing 9.
  
 0.758
ENSGMOP00000003121
annotation not available
  
 0.726
ENSGMOP00000009946
Tudor and KH domain containing.
   
0.707
ENSGMOP00000007198
annotation not available
   
 0.688
ENSGMOP00000009645
annotation not available
   
 0.688
DDX3X
DEAD-box helicase 3 X-linked.
  
 0.675
ENSGMOP00000002606
Adenine phosphoribosyltransferase.
    
 0.672
ENSGMOP00000002022
annotation not available
   
 0.658
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.