STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000005560Capicua transcriptional repressor b. (2164 aa)    
Predicted Functional Partners:
ENSGMOP00000000384
annotation not available
    
 
 0.824
ENSGMOP00000002862
annotation not available
    
 
 0.824
ENSGMOP00000014453
Ataxin 1b.
    
 
 0.824
ENSGMOP00000016394
annotation not available
    
 
 0.711
ENSGMOP00000012392
LIM domain kinase 1a.
    
 0.554
ENSGMOP00000007492
LIM domain kinase 1b.
    
 0.543
ENSGMOP00000019792
annotation not available
    
 0.532
ENSGMOP00000000179
Leucine rich repeat containing 28.
    
  0.506
ENSGMOP00000001114
Inter-alpha-trypsin inhibitor heavy chain 5.
    
  0.506
ENSGMOP00000001916
Testis associated actin remodelling kinase 2.
    
  0.506
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.