STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000005564LTV1 ribosome biogenesis factor. (474 aa)    
Predicted Functional Partners:
bysl
Bystin like.
   
 0.999
ENSGMOP00000011066
TSR1 ribosome maturation factor.
   
 0.999
ENSGMOP00000011394
NIN1 (RPN12) binding protein 1 homolog.
   
 0.999
ENSGMOP00000012144
RIO kinase 2 (yeast).
   
 0.999
rps2
Ribosomal protein S2.
    
 0.999
rps3
Ribosomal protein S3.
   
 0.998
ENSGMOP00000013261
Ribosomal protein S14.
    
 0.997
rps6
Ribosomal protein S6.
    
 0.997
RPS20
Ribosomal protein S20.
    
 0.997
rps9
Ribosomal protein S9.
   
 0.996
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.