STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000005611Zinc finger DHHC-type containing 9. (377 aa)    
Predicted Functional Partners:
GOLGA7
Golgin A7.
    
 0.838
golga7b
Golgin A7 family member B.
    
 0.792
ENSGMOP00000017563
annotation not available
    
 0.692
ENSGMOP00000017621
annotation not available
    
 0.651
ENSGMOP00000006397
Coenzyme Q3 methyltransferase.
     
 0.549
ENSGMOP00000008600
Nibrin.
    
  0.537
ENSGMOP00000014528
RAD50 homolog, double strand break repair protein.
    
 0.534
ENSGMOP00000013757
MRE11 homolog A, double strand break repair nuclease.
    
  0.518
ENSGMOP00000010903
HRas proto-oncogene, GTPase b.
    
 0.491
ENSGMOP00000011326
v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog.
    
 0.491
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.