STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000005677PRP31 pre-mRNA processing factor 31 homolog (yeast). (513 aa)    
Predicted Functional Partners:
snu13
Small nuclear ribonucleoprotein 13.
    
 0.998
ENSGMOP00000009135
PRP3 pre-mRNA processing factor 3 homolog (yeast).
   
 0.997
ENSGMOP00000015022
PRP4 pre-mRNA processing factor 4 homolog (yeast).
   
 0.997
ENSGMOP00000016770
PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae).
   
 0.997
ENSGMOP00000002222
pre-mRNA processing factor 8.
    
 0.996
ENSGMOP00000005227
Small nuclear ribonucleoprotein 200 (U5).
    
 0.995
ENSGMOP00000003709
Microfibril associated protein 1.
   
 0.992
eftud2
Elongation factor Tu GTP binding domain containing 2.
   
 0.991
ENSGMOP00000016266
Peptidylprolyl isomerase H (cyclophilin H).
    
 0.991
ENSGMOP00000017496
Small nuclear ribonucleoprotein polypeptide E.
    
 0.985
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.