STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000005717annotation not available (199 aa)    
Predicted Functional Partners:
ENSGMOP00000003960
Apoptosis inducing factor mitochondrion associated 1.
  
 0.531
ENSGMOP00000001330
annotation not available
 
      0.482
ENSGMOP00000001513
Histone deacetylase 11.
   
  0.472
ENSGMOP00000004756
Histone deacetylase 12.
   
  0.472
ENSGMOP00000015866
Interferon induced with helicase C domain 1.
   
 
 0.445
ENSGMOP00000001496
Histone deacetylase 3.
   
  0.442
HDAC2
Histone deacetylase 2.
   
  0.442
ENSGMOP00000003469
annotation not available
   
  0.442
ENSGMOP00000020442
Histone deacetylase 8.
   
  0.442
HDAC1
Histone deacetylase 1.
   
  0.442
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.