STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000005719annotation not available (281 aa)    
Predicted Functional Partners:
ENSGMOP00000007404
Interactor of little elongator complex ELL subunit 2.
    
 0.828
ENSGMOP00000005696
annotation not available
 
      0.750
ENSGMOP00000001611
Zinc finger CCCH-type containing 4.
   
 
 0.671
ENSGMOP00000016907
Zinc finger CCCH-type containing 6.
   
 
 0.671
ENSGMOP00000006608
Terminal nucleotidyltransferase 4B.
   
 
  0.645
ENSGMOP00000017092
ELL associated factor 1.
    
 
 0.628
ENSGMOP00000003210
annotation not available
    
 0.560
ENSGMOP00000009324
Elongation factor RNA polymerase II.
    
 0.560
ENSGMOP00000009508
Elongation factor, RNA polymerase II, 2.
    
 0.560
ENSGMOP00000013971
Si:ch211-13k12.2.
    
 0.560
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.