STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000005727Solute carrier family 10 member 7. (318 aa)    
Predicted Functional Partners:
ENSGMOP00000020469
Transmembrane protein 165.
      
 0.528
ENSGMOP00000003822
Solute carrier family 10 member 3.
      
 0.471
ENSGMOP00000016158
Biogenesis of lysosomal organelles complex-1, subunit 6, pallidin.
    
 0.469
ENSGMOP00000008300
Solute carrier family 10 member 4.
      
 0.456
ENSGMOP00000004152
annotation not available
   
  
 0.416
ENSGMOP00000014126
Biogenesis of lysosomal organelles complex-1, subunit 1.
     
 0.411
ENSGMOP00000017410
Inositol monophosphatase domain containing 1.
      
 0.410
ENSGMOP00000000564
Solute carrier family 10 member 1.
      
 0.403
SLC10A1
Solute carrier family 10 member 1.
      
 0.403
SLC35F5
Solute carrier family 35 member F5.
     
 0.402
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.