STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000005762ATP-binding cassette, sub-family G (WHITE), member 4a. (644 aa)    
Predicted Functional Partners:
ENSGMOP00000008913
ATP-binding cassette, sub-family G (WHITE), member 5.
   
0.909
ENSGMOP00000014752
Apolipoprotein A-IV b, tandem duplicate 2.
   
 0.769
ENSGMOP00000004343
annotation not available
   
 0.760
ENSGMOP00000019509
Cytochrome c oxidase assembly homolog 15 (yeast).
    
 0.653
atp5f1a
ATP synthase F1 subunit alpha.
   
 
 0.636
atp5f1c
ATP synthase F1 subunit gamma.
  
   0.632
atp5f1d
ATP synthase F1 subunit delta.
  
   0.622
igbp1
Immunoglobulin binding protein 1.
    
 0.619
ENSGMOP00000000006
TIP41, TOR signaling pathway regulator-like (S. cerevisiae).
     
 0.584
ENSGMOP00000007924
2-epi-5-epi-valiolone synthase.
   
 
 0.581
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.