STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000005782annotation not available (174 aa)    
Predicted Functional Partners:
ENSGMOP00000005769
annotation not available
 
     0.939
ENSGMOP00000013764
annotation not available
 
 
   0.909
ENSGMOP00000004323
annotation not available
 
      0.899
ENSGMOP00000018109
annotation not available
 
  
 0.893
ENSGMOP00000018751
annotation not available
 
 
   0.885
ENSGMOP00000002437
Protein tyrosine phosphatase non-receptor type 2b.
 
  
  0.814
ENSGMOP00000014474
Protein tyrosine phosphatase non-receptor type 2a.
 
  
  0.788
ENSGMOP00000021015
Protein tyrosine phosphatase non-receptor type 1.
 
  
  0.771
ENSGMOP00000015800
WW and C2 domain containing 1.
    
 0.696
ptpn6
Protein tyrosine phosphatase non-receptor type 6.
 
  
 0.672
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.