STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000005814LSM14A mRNA processing body assembly factor a. (430 aa)    
Predicted Functional Partners:
EIF4ENIF1
Eukaryotic translation initiation factor 4E nuclear import factor 1.
   
 
 0.899
ENSGMOP00000021970
Decapping mRNA 2.
    
 
 0.860
ENSGMOP00000003766
annotation not available
   
 
 0.837
ENSGMOP00000010200
DEAD (Asp-Glu-Ala-Asp) box helicase 6.
   
 
 0.837
ENSGMOP00000014711
DEAD (Asp-Glu-Ala-Asp) box helicase 61.
   
 
 0.837
edc3
Enhancer of mRNA decapping 3.
    
 
 0.814
ENSGMOP00000015250
Decapping mRNA 1A.
    
 
 0.732
ENSGMOP00000013887
Decapping mRNA 1B.
    
 
 0.728
ENSGMOP00000007933
YjeF N-terminal domain containing 3.
    
 
 0.651
ENSGMOP00000014245
NAD(P)HX epimerase.
    
 
 0.651
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.