STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000005856Ribosomal protein S6 kinase polypeptide 1. (958 aa)    
Predicted Functional Partners:
ENSGMOP00000001229
RAD50 interactor 1.
   
 0.993
ENSGMOP00000014343
Unconventional SNARE in the ER 1 homolog (S. cerevisiae).
    
 0.993
ENSGMOP00000018754
Syntaxin 18.
    
 0.993
ENSGMOP00000014118
Zw10 kinetochore protein.
    
 0.992
ENSGMOP00000012070
NBAS subunit of NRZ tethering complex.
   
 0.906
ENSGMOP00000003271
Sorting nexin 11.
     
 0.851
ENSGMOP00000009275
Sorting nexin 10b.
     
 0.851
ENSGMOP00000011534
Sorting nexin 12.
     
 0.851
ENSGMOP00000014240
Sorting nexin 10a.
     
 0.851
snx3
Sorting nexin 3.
     
 0.851
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.