STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000006159Sorbitol dehydrogenase. (324 aa)    
Predicted Functional Partners:
ENSGMOP00000015095
Xylulokinase homolog (H. influenzae).
  
 
 0.952
adhfe1
Alcohol dehydrogenase iron containing 1.
  
 
 0.944
tpi1
Triosephosphate isomerase 1.
  
 0.940
ENSGMOP00000017029
Branched chain keto acid dehydrogenase E1 subunit alpha.
  
 
 0.939
ENSGMOP00000002424
Galactose mutarotase.
  
 
 0.938
ENSGMOP00000000046
Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase.
  
 
 0.934
ENSGMOP00000003464
Coenzyme Q2 4-hydroxybenzoate polyprenyltransferase.
  
 
 0.934
LOC115533567
Ribulose-phosphate 3-epimerase-like.
  
 
 0.934
ENSGMOP00000002102
Ribokinase.
  
 
 0.933
ENSGMOP00000000526
Phosphogluconate dehydrogenase.
  
 0.931
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.