STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP000000061683-hydroxy-3-methylglutaryl-CoA reductase a. (848 aa)    
Predicted Functional Partners:
ENSGMOP00000014202
3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble).
  
 
 0.992
ENSGMOP00000012816
Mevalonate kinase.
  
 0.949
ENSGMOP00000000436
UbiA prenyltransferase domain containing 1.
   
 
 0.937
ENSGMOP00000003913
Mevalonate (diphospho) decarboxylase a.
  
 
 0.930
ENSGMOP00000005915
Squalene epoxidase a.
   
  
 0.928
ENSGMOP00000007576
Cytochrome P450, family 51.
  
  
 0.922
ENSGMOP00000003723
Protein kinase, AMP-activated, alpha 1 catalytic subunit.
    
 0.854
ENSGMOP00000008352
Protein kinase, AMP-activated, alpha 2 catalytic subunit.
    
 0.854
ENSGMOP00000016004
annotation not available
  
  
 
0.844
ENSGMOP00000019217
Isopentenyl-diphosphate delta isomerase 1.
 
  
 0.819
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.