STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000006173ATRX chromatin remodeler. (1822 aa)    
Predicted Functional Partners:
rad51
RAD51 recombinase.
   
 
 0.883
ENSGMOP00000018683
annotation not available
   
 0.827
ENSGMOP00000020159
Translocase of outer mitochondrial membrane 20.
   
 0.827
ENSGMOP00000002246
annotation not available
   
 0.811
ENSGMOP00000000084
THO complex 2.
   
 
 0.800
ENSGMOP00000013181
Myb-like, SWIRM and MPN domains 1.
   
 0.792
ruvbl1
RuvB like AAA ATPase 1.
    
 0.791
ENSGMOP00000003755
Actin related protein 5.
    
 0.789
ENSGMOP00000010653
Polymerase (RNA) II (DNA directed) polypeptide F.
   
 0.769
MECP2
methyl-CpG binding protein 2.
    
 0.741
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.