STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000006225annotation not available (216 aa)    
Predicted Functional Partners:
ENSGMOP00000016098
Proline-rich coiled-coil 2C.
 
      0.900
YTHDC2
YTH domain containing 2.
   
 
 0.564
ENSGMOP00000003646
Eukaryotic translation initiation factor 3, subunit H, b.
    
 
 0.520
ENSGMOP00000003867
Eukaryotic translation initiation factor 3, subunit F.
   
   0.477
ENSGMOP00000007511
annotation not available
   
 
 0.477
ENSGMOP00000009426
Ubiquitin associated protein 2a.
   
 
 0.477
ENSGMOP00000011577
Ubiquitin associated protein 2-like.
   
 
 0.477
ENSGMOP00000016020
YTH N(6)-methyladenosine RNA binding protein 3.
    
 
 0.466
ENSGMOP00000020166
YTH N(6)-methyladenosine RNA binding protein 2.
    
 
 0.466
YTHDF1
YTH N6-methyladenosine RNA binding protein 1.
    
 
 0.463
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.