STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000006430INO80 complex ATPase subunit. (1376 aa)    
Predicted Functional Partners:
ENSGMOP00000003755
Actin related protein 5.
    
 0.991
ruvbl1
RuvB like AAA ATPase 1.
    
 0.985
ino80e
INO80 complex subunit E.
    
 0.983
ENSGMOP00000020781
Nuclear factor related to kappaB binding protein.
   
 0.976
ENSGMOP00000019466
RuvB-like AAA ATPase 2.
   
 0.961
ENSGMOP00000000049
INO80 complex subunit C.
    
 0.948
actr8
Actin related protein 8.
    
 0.944
ENSGMOP00000014108
Ubiquitin carboxyl-terminal hydrolase L5.
    
 0.926
pcna
Proliferating cell nuclear antigen.
  
 0.923
mcrs1
Microspherule protein 1.
   
 0.908
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.