STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000006436annotation not available (232 aa)    
Predicted Functional Partners:
ENSGMOP00000006942
Nucleolar protein 9.
   
 0.942
ENSGMOP00000006958
annotation not available
   
 0.942
ENSGMOP00000019637
WD repeat domain 18.
   
 0.912
ENSGMOP00000015635
Testis expressed 10.
   
 0.901
ENSGMOP00000011222
annotation not available
    
 0.829
ENSGMOP00000006637
annotation not available
   
 0.782
ENSGMOP00000019734
SUMO specific peptidase 3b.
   
 0.782
ENSGMOP00000000565
BOP1 ribosomal biogenesis factor.
   
  0.759
ENSGMOP00000005077
Centrosomal protein 152.
   
  0.759
ENSGMOP00000004393
EBNA1 binding protein 2.
   
 
  0.752
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.