STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000006505Cerebral dopamine neurotrophic factor. (158 aa)    
Predicted Functional Partners:
ENSGMOP00000002587
Heat shock protein 5.
   
 
 0.920
ENSGMOP00000021444
annotation not available
   
    0.776
ENSGMOP00000016337
Superoxide dismutase 1, soluble.
     
 0.629
ENSGMOP00000017089
Hypoxia up-regulated 1.
   
 
 0.589
ENSGMOP00000000529
X-box binding protein 1.
   
  
 0.526
ENSGMOP00000020066
Brain-derived neurotrophic factor.
      
 0.495
ENSGMOP00000001609
ATPase Na+/K+ transporting subunit beta 4.
   
    0.470
NRTN
Neurturin.
      
 0.451
ENSGMOP00000000915
DnaJ (Hsp40) homolog, subfamily C, member 10.
   
 0.424
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.