STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000006586Sec1 family domain containing 1. (403 aa)    
Predicted Functional Partners:
ENSGMOP00000010832
Bet1 golgi vesicular membrane trafficking protein.
   
 0.999
ENSGMOP00000005585
Golgi SNAP receptor complex member 2.
    
 0.998
ykt6
YKT6 v-SNARE homolog.
    
 0.998
ENSGMOP00000009491
Syntaxin 5A.
    
 0.998
ENSGMOP00000002602
Golgi SNAP receptor complex member 1.
    
 
 0.989
BET1L
Bet1 golgi vesicular membrane trafficking protein like.
   
 0.979
ENSGMOP00000017547
USO1 vesicle transport factor.
   
 0.967
ENSGMOP00000018754
Syntaxin 18.
    
 
 0.966
ENSGMOP00000000788
annotation not available
   
 0.960
ENSGMOP00000019557
SEC22 homolog B, vesicle trafficking protein b.
   
 0.960
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.