STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000006648Coiled-coil domain containing 106b. (337 aa)    
Predicted Functional Partners:
ENSGMOP00000012944
Sorting nexin 15.
      
 0.590
ENSGMOP00000005474
Ring finger and SPRY domain containing 1.
      
 0.541
ENSGMOP00000014505
Nudix (nucleoside diphosphate linked moiety X)-type motif 13.
      
 0.525
ENSGMOP00000002546
Zinc finger CCCH-type containing 15.
      
 0.524
ENSGMOP00000006067
F-box protein 9.
      
 0.519
ENSGMOP00000017799
Zgc:153293.
      
 0.517
ENSGMOP00000019996
SET domain containing 5.
      
 0.487
ENSGMOP00000018402
Transmembrane protein, adipocyte asscociated 1.
      
 0.463
ENSGMOP00000001662
Nudix (nucleoside diphosphate linked moiety X)-type motif 12.
      
 0.424
ENSGMOP00000008291
Tumor protein p53.
    
 
 0.423
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.