STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galcGalactosylceramidase. (689 aa)    
Predicted Functional Partners:
ENSGMOP00000000904
N-acylsphingosine amidohydrolase (acid ceramidase) 1b.
     
 0.921
ENSGMOP00000013124
Arylsulfatase A.
     
 0.917
ENSGMOP00000020377
Glucosidase, beta, acid.
     
 0.910
ENSGMOP00000001279
Sphingomyelin phosphodiesterase 1.
     
 0.892
ENSGMOP00000018949
Glucosidase, beta (bile acid) 2.
     
 0.892
ENSGMOP00000005104
UDP-glucose ceramide glucosyltransferase.
     
 0.870
ENSGMOP00000008877
Zgc:158263.
     
 0.870
ENSGMOP00000011812
Alkaline ceramidase 1.
     
 0.870
ENSGMOP00000012244
Galactosidase, alpha.
     
 0.870
ENSGMOP00000012563
Zgc:91976.
     
 0.870
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.