STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000006688Rho GTPase activating protein 18. (553 aa)    
Predicted Functional Partners:
ENSGMOP00000004993
Tensin 2a.
    
 
 0.636
TNS3
Tensin 3.
    
 
 0.636
TNS3-2
Tensin 3.
    
 
 0.636
ENSGMOP00000019499
Tensin 1b.
    
 
 0.636
ENSGMOP00000020938
Tensin 2b.
    
 
 0.636
LOC115531057
Transforming protein RhoA-like.
   
 0.527
LOC115553663
Rho-related GTP-binding protein RhoA-D.
   
 0.527
LOC115557462
Rho-related GTP-binding protein RhoA-B.
   
 0.527
ENSGMOP00000011856
annotation not available
   
 0.527
ENSGMOP00000018454
annotation not available
   
 0.527
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.