STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000006723annotation not available (338 aa)    
Predicted Functional Partners:
ENSGMOP00000017985
Polymerase (DNA directed), delta 2, regulatory subunit.
    
 0.758
ENSGMOP00000002246
annotation not available
    
 0.754
ENSGMOP00000018574
Survival of motor neuron 1, telomeric.
    
 0.701
ENSGMOP00000014791
Small nuclear ribonucleoprotein D2 polypeptide.
    
 0.689
ENSGMOP00000015516
Polymerase (DNA directed), delta 1, catalytic subunit.
   
 0.684
ENSGMOP00000009249
MUS81 structure-specific endonuclease subunit.
    
 0.667
ENSGMOP00000017496
Small nuclear ribonucleoprotein polypeptide E.
   
 0.663
ENSGMOP00000008279
Small nuclear ribonucleoprotein polypeptide F.
    
  0.652
ENSGMOP00000011583
annotation not available
    
 0.635
ndufab1
NADH:ubiquinone oxidoreductase subunit AB1.
    
  0.629
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.