STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000006730annotation not available (303 aa)    
Predicted Functional Partners:
ENSGMOP00000015781
Mtr4 exosome RNA helicase.
   
 
 0.893
ENSGMOP00000002297
annotation not available
  
  
 
0.837
ENSGMOP00000006608
Terminal nucleotidyltransferase 4B.
   
 
 0.744
TENT4A
Terminal nucleotidyltransferase 4A.
   
 
 0.713
ENSGMOP00000014440
Terminal nucleotidyltransferase 4A.
   
 
 0.713
ENSGMOP00000006330
SKI2 homolog, superkiller viralicidic activity 2-like.
   
 
 0.624
ENSGMOP00000006518
Exosome component 10.
   
 
 0.551
ENSGMOP00000012350
annotation not available
   
 
 0.536
ENSGMOP00000015302
NOP53 ribosome biogenesis factor.
   
 
 0.520
NCBP1
Nuclear cap binding protein subunit 1.
    
 
 0.507
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.