STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000006753Si:dkey-90l8.3. (157 aa)    
Predicted Functional Partners:
ENSGMOP00000004712
annotation not available
   
 0.658
ENSGMOP00000014621
LIM domain binding 2a.
   
 0.658
ENSGMOP00000021000
LIM-domain binding 1b.
   
 0.658
ENSGMOP00000019217
Isopentenyl-diphosphate delta isomerase 1.
    
   0.622
ENSGMOP00000001614
annotation not available
    
 0.567
ENSGMOP00000009498
Serum response factor b.
    
 0.567
ENSGMOP00000000789
annotation not available
    
 
 0.506
ENSGMOP00000005311
annotation not available
    
  0.494
ENSGMOP00000005330
annotation not available
    
  0.494
ENSGMOP00000005370
annotation not available
    
  0.494
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.