STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000007027Rho GTPase activating protein 25. (593 aa)    
Predicted Functional Partners:
ENSGMOP00000000345
Rac family small GTPase 3b.
   
 0.536
RAC1
Rac family small GTPase 1.
   
 0.536
ENSGMOP00000008270
Rac family small GTPase 2.
   
 0.536
ENSGMOP00000009517
Rac family small GTPase 1b.
   
 0.536
ENSGMOP00000000791
Aldehyde oxidase 6.
   
 
  0.470
ENSGMOP00000013527
Xanthine dehydrogenase.
   
 
  0.470
ENSGMOP00000015437
annotation not available
    
0.434
LOC115540915
Cell division control protein 42 homolog.
   
 0.432
CDC42
Cell division cycle 42.
   
 0.432
LOC115553989
Cell division control protein 42 homolog.
   
 0.429
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.