STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000007072Zinc finger protein 592. (1017 aa)    
Predicted Functional Partners:
ENSGMOP00000004778
Integrator complex subunit 3.
    
   0.947
ENSGMOP00000013035
Integrator complex subunit 5.
    
   0.947
ENSGMOP00000005330
annotation not available
    
  0.871
ENSGMOP00000005370
annotation not available
    
  0.871
ENSGMOP00000015036
Protein kinase C binding protein 1, like.
    
 
 0.702
ENSGMOP00000018714
Zinc finger, MYND-type containing 8.
    
 
 0.702
ENSGMOP00000009901
Integrator complex subunit 6.
    
   0.673
ENSGMOP00000010713
NME/NM23 family member 8.
    
 0.606
ENSGMOP00000005311
annotation not available
    
  0.592
ENSGMOP00000013739
annotation not available
    
  0.582
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.