STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB8ARAB8A, member RAS oncogene family. (206 aa)    
Predicted Functional Partners:
ENSGMOP00000016057
RAB3A interacting protein (rabin3).
    
 0.837
ENSGMOP00000019463
RAB3A interacting protein (rabin3)-like 1.
    
 0.837
ENSGMOP00000002675
GDP dissociation inhibitor 2.
   
 0.820
LOC115557592
Rab GDP dissociation inhibitor alpha.
   
 0.820
ENSGMOP00000008751
Zgc:112334.
   
 0.820
ENSGMOP00000004012
Exocyst complex component 4.
    
 0.809
c9orf72
C9orf72-SMCR8 complex subunit.
    
 0.791
ENSGMOP00000020156
Exocyst complex component 1.
   
 0.786
ENSGMOP00000018303
Exocyst complex component 2.
    
 0.783
ENSGMOP00000005203
annotation not available
    
 0.782
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.