STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
psmb7Proteasome 20S subunit beta 7. (277 aa)    
Predicted Functional Partners:
psma5
Proteasome 20S subunit alpha 5.
   
0.996
ENSGMOP00000009128
Proteasome 20S subunit beta 4.
   
 0.995
psmb1
Proteasome 20S subunit beta 1.
   
0.995
ENSGMOP00000013894
Proteasome 20S subunit beta 3.
   
 0.995
ENSGMOP00000014818
Proteasome 20S subunit alpha 1.
   
 0.995
ENSGMOP00000019115
Proteasome 20S subunit beta 6.
   
0.995
ENSGMOP00000010168
Proteasome 20S subunit beta 2.
   
 0.994
ENSGMOP00000010221
Proteasome 20S subunit alpha 2.
   
 0.993
ENSGMOP00000016643
Proteasome 20S subunit alpha 3.
   
 0.993
ENSGMOP00000021065
Proteasome 20S subunit alpha 4.
   
 0.993
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.