STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000007239RUN and FYVE domain containing 1. (650 aa)    
Predicted Functional Partners:
ENSGMOP00000013326
RAB4a, member RAS oncogene family.
    
 0.910
ENSGMOP00000001938
RAB4B, member RAS oncogene family.
    
 0.901
ENSGMOP00000000521
annotation not available
    
 0.721
ENSGMOP00000012581
annotation not available
    
 0.721
ENSGMOP00000012266
Bruton agammaglobulinemia tyrosine kinase.
    
  0.715
ENSGMOP00000014792
IL2 inducible T cell kinase.
    
  0.715
ENSGMOP00000019022
Phosphatidylinositol 3-kinase, catalytic subunit type 3.
     
 0.693
rufy2
RUN and FYVE domain containing 2.
  
 
  
0.675
ENSGMOP00000009272
Mitochondrial calcium uptake 2.
   
 0.639
ENSGMOP00000018589
Mitochondrial calcium uptake 1.
   
 0.639
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.