STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000007248Heparin-binding EGF-like growth factor a. (209 aa)    
Predicted Functional Partners:
ENSGMOP00000011255
annotation not available
    
 0.917
ENSGMOP00000012118
annotation not available
    
 0.917
ENSGMOP00000016862
annotation not available
    
 0.917
ENSGMOP00000000243
Erb-b2 receptor tyrosine kinase 4b.
    
 0.885
ENSGMOP00000008164
Erb-b2 receptor tyrosine kinase 3a.
    
 0.885
ENSGMOP00000001482
Matrix metallopeptidase 9.
   
 0.860
ENSGMOP00000001762
annotation not available
   
 0.860
ENSGMOP00000004368
Matrix metallopeptidase 2.
    
  0.855
ENSGMOP00000005182
Erb-b2 receptor tyrosine kinase 3b.
    
 0.853
ENSGMOP00000011333
Matrix metallopeptidase 15b.
   
 0.849
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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