STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNPT1Polyribonucleotide nucleotidyltransferase 1. (768 aa)    
Predicted Functional Partners:
ENSGMOP00000002665
Ferredoxin-fold anticodon binding domain containing 1.
  
  
 0.917
ENSGMOP00000007974
tRNA nucleotidyl transferase, CCA-adding, 1.
  
 0.883
ENSGMOP00000000878
Ts translation elongation factor, mitochondrial.
  
  
 0.880
ENSGMOP00000000230
Mitochondrial translational initiation factor 2.
  
  
 0.877
ENSGMOP00000002198
Eukaryotic translation initiation factor 5B.
  
  
 0.877
ENSGMOP00000006518
Exosome component 10.
   
 
 0.866
ENSGMOP00000008696
Mitochondrial ribosomal protein L20.
  
  
 0.858
rps9
Ribosomal protein S9.
  
  
 0.850
imp3
IMP U3 small nucleolar ribonucleoprotein 3.
  
  
 0.850
polr2c
RNA polymerase II subunit C.
  
  
 0.842
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.