STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000007287Multiple coagulation factor deficiency 2. (155 aa)    
Predicted Functional Partners:
lman1
Lectin, mannose binding 1.
   
 0.997
ENSGMOP00000007557
Coagulation factor V.
     
 0.734
ENSGMOP00000013103
Coagulation factor VIII, procoagulant component.
     
 0.734
ENSGMOP00000018821
SEC24 homolog C, COPII coat complex component.
     
 0.697
ENSGMOP00000004761
Cathepsin C.
     
 0.666
ENSGMOP00000008234
SEC24 homolog D, COPII coat complex component.
     
 0.664
ENSGMOP00000006586
Sec1 family domain containing 1.
     
 0.663
ENSGMOP00000013520
Lectin, mannose-binding 2-like b.
     
 0.663
ENSGMOP00000015182
Lectin, mannose-binding 2.
     
 0.663
ENSGMOP00000016043
Lectin, mannose-binding 2-like a.
     
 0.663
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.