STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000007331UTP11 small subunit processome component. (249 aa)    
Predicted Functional Partners:
ENSGMOP00000001946
UTP3 small subunit processome component.
   
 0.999
ENSGMOP00000003262
Nucleolar complex associated 4 homolog.
   
  0.999
NOP14
NOP14 nucleolar protein.
   
 0.999
dcaf13
DDB1 and CUL4 associated factor 13.
   
  0.999
ENSGMOP00000016784
FCF1 rRNA-processing protein.
   
 0.999
ENSGMOP00000018282
WD repeat domain 46.
   
 0.999
ENSGMOP00000004108
Neuroguidin, EIF4E binding protein.
   
 0.998
ENSGMOP00000007274
UTP20 small subunit processome component.
   
 0.998
ENSGMOP00000008125
Apoptosis antagonizing transcription factor.
   
 
 0.998
ENSGMOP00000011792
EMG1 N1-specific pseudouridine methyltransferase.
   
 0.998
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.