STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000007391Armadillo repeat containing 8. (673 aa)    
Predicted Functional Partners:
RANBP10
RAN binding protein 10.
   
 
 0.950
ENSGMOP00000019475
RAN binding protein 9.
   
 
 0.950
LOC115542953
Glucose-induced degradation protein 8-B homolog.
    
 
 0.948
ENSGMOP00000021079
GID complex subunit 8 homolog a (S. cerevisiae).
    
 
 0.948
GID4
GID complex subunit 4 homolog.
    
 
 0.946
GID4-2
GID complex subunit 4 homolog.
    
 
 0.946
ENSGMOP00000001619
WD repeat domain 26b.
    
 
 0.912
WDR26
WD repeat domain 26.
    
 
 0.912
ENSGMOP00000002330
annotation not available
   
 
 0.876
ENSGMOP00000017673
SPRY domain containing 3.
   
 
 0.876
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.